Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934159.1_cds_XP_016480305.1_71756
CDS Infomation

[gene=LOC107801488] [db_xref=GeneID:107801488] [protein=katanin p80 WD40 repeat-containing subunit B1 homolog isoform X2] [protein_id=XP_016480305.1] [location=complement(join(11600..11749,12663..12781,12856..12915,13744..14268,14458..14686,14784..14927,15017..15091,15235..15305,16438..16540,17892..18118,18202..18319,18728..18858,19491..19521))] [gbkey=CDS]
Sequence

ATGACAACCACTAAACGTGCTTATAAGCTACAGGAATTTGTAGCACATTCTTTAAGCGTG
AATAGCTTAAAGATAGGGAGGAAATCATCCAGGGTTCTTGTAACCGGGGGAGAAGATCAC
AAGGTTAACCTCTGGTCCATTGGCAAGCCTGATGCCATATTGAGTTTGTCAGGTCATTCA
AGCGGAATTGATTCAGTTAGCTTTGATTCTTCAGAAGTTCTGGTAGCTGCAGGAGCAGCA
AGTGGTACTATCAAGCTTTGGGATTTAGAGGAGGCCAAGATTCTTCGGACTCTCACTGGA
CATAGATCCAATTGTATATCATTGGACTTCCATCCCTTTGGTGAGTTCTTTGCATCTGGG
TCTCTGGACACAAATCTAAAGATATGGGATATTAGACGCAAAGGGTGCACTCACACATAC
AAAGGGCACAGTAGAGGTGTCAACACCATCAGGTTCACGCCAGATGGCCGCTGGGTTGTA
TCTGGTGGAGAAGACAGTACCGTAAAGATATGGGATTTAACTGCAGGAAAGCTTTTACAT
GATTTCAAATGTCATGAAGGACAAATTCGGTCAATAGACTTTCATCCTCATGAATTTTTA
CTGGCAACAGGTTCTGCTGACAAAACAGTTAAATTCTGGGACCTTGAAACTTTTGAACTC
ATAGGTTCTGCTGGACCTGAGACAACAGGAGTGCGTTGCATGGCCTTTAATACCGATGGA
AGAACCCTTCTTTGTGGTTTACATGAGAATTTGAAGGTTTTCTCGTGGGAACCAATTAGG
TATCATGATACAGTAGATGTTGGCTGGTCTACATTGTCTGATCTTAGTATTCATGAAGGA
AAACTTCTTGGATGTTCTTACAATCAAAGTTGTGTTGGAGTGTGGGTTGTCGATATTTCA
TGTCTTGAACCATATACAGTGGATAGTACTACACGATTAAATGGTCACTCAGTAGTGAAA
TCCAATTTGAGAGCGAATTTATCCACTCCGGCTGAGGATGCCACAGATGCAAGTTTCGGG
AGACTATTAAGTTCACAAAACTCTGATCCTGTGAAAGAATCCAAGTATTTTGGAAGACTT
TCTTTGTCACACAACAAGGATCTTCAGAAGGATTCTACTACTCTTACTACTATCACGGAT
ACTCCTGACACTTCACAAAAAATCAATCTCAGTACTGGTCCAAGAGCACCTCCAATCAGC
TCAAGAACAGTTCCTAATACGACTGGTGTAAAGAGGAATTCGTCAAAAGGCCAGTCAACA
GAAAATGCTTCTATTGTCAATAAATCAGAGATAATACCTGTTCTTGTCCCAAGAAATAAT
GAAAGAATGGAGCTGGCATCCGAACGCAGGAAAGGAGGAGTTGCAGGAAGGGAAATGCCA
CAAAGATTGCAGCCAAAAGTATCTGATTGGAAGTCTCCTACCCCCAACGAAAACCTTGGG
AGGCCGACTGCTGCAGCACAGTCTGAAGTTGAAGTACCTAAGGCTATTGAAAGTAGCAGT
CCTGCAGATAGGAACATTTTCCCTTTTGTTAAATGCTCAATATTTGGAAATGCTGCTACT
GACAGAAACGTGAATGATGACAAGAATTTAGTTTCCACAAAACATGAAATGGATACAGCA
TCGGAATCGCTTTCCAGACACCAAATTGAAGATTATGAAGCCCGTGGAAATATTCTAAAT
AGGAATCCTTATTCCATGCAAGGTCAACTAAGAGGAAGGACACAGTCTACTGTTGCAAAT
TTGGAAAAGAGAGACAGAGTTCCTAATTATGAGGGTCTTGCTTCCTGCATTGCCCGGGCG
GTACCTGATCCGGATGTGGTTCCAACCAATATGAGAGAAGACCCCCTTTCAGCTGTAAGT
GAGGTGGTTGTTGCTGCCGATGAGGATACCATTGCGGTGTTGATGGAACAGCACAACCAA
TTTGTTGGCTCGCTGCAATCTCGTTTGGCTAAATTACAGGTAGCAATTTGGAAAACTCAC
TAG

Peptide Sequence

PEP ID

XP_016480305.1
PEP Infomation

PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog isoform X2 [Nicotiana tabacum]
Sequence

MTTTKRAYKLQEFVAHSLSVNSLKIGRKSSRVLVTGGEDHKVNLWSIGKPDAILSLSGHS
SGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKILRTLTGHRSNCISLDFHPFGEFFASG
SLDTNLKIWDIRRKGCTHTYKGHSRGVNTIRFTPDGRWVVSGGEDSTVKIWDLTAGKLLH
DFKCHEGQIRSIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETTGVRCMAFNTDG
RTLLCGLHENLKVFSWEPIRYHDTVDVGWSTLSDLSIHEGKLLGCSYNQSCVGVWVVDIS
CLEPYTVDSTTRLNGHSVVKSNLRANLSTPAEDATDASFGRLLSSQNSDPVKESKYFGRL
SLSHNKDLQKDSTTLTTITDTPDTSQKINLSTGPRAPPISSRTVPNTTGVKRNSSKGQST
ENASIVNKSEIIPVLVPRNNERMELASERRKGGVAGREMPQRLQPKVSDWKSPTPNENLG
RPTAAAQSEVEVPKAIESSSPADRNIFPFVKCSIFGNAATDRNVNDDKNLVSTKHEMDTA
SESLSRHQIEDYEARGNILNRNPYSMQGQLRGRTQSTVANLEKRDRVPNYEGLASCIARA
VPDPDVVPTNMREDPLSAVSEVVVAADEDTIAVLMEQHNQFVGSLQSRLAKLQVAIWKTH

Transcript Sequence

Gene sequence data has not been registered.